Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTK-ATETLLKVLADYTQNIGFIAPKQTGIGVGLVGRVDHKSGVW-LEIEPGKSNPTPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDIHS---------DVLCGCGRRGCVERLASGLGIKEEALRHLNSYPTSILAETQTELTGKMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEHFFQKIQDNLQSNTIRF-VTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE |
| 2AP1 Chain:A ((23-326)) | ---NAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHT-SYSAFLDAVCELVEEADQR----FGVKGSVGIGIPGMPETEDGTLYAANVPAAS-GKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHYYD-----------QSLQAPEIIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHG-DAGGMRGAAFLHLT-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2AP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -150407 for 2519 contacts (-59.7/contact) +
2D Compatibility (PS) -31741 + (NN) -17748 + (LL) 1176
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -215820.0 ( -85.68 by residue)
QMean score : 0.497
|
|
|