Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVETIDVFSPVELYLLLSPIEAQHLFGVPDKLT--FLLKGEDVFAEGFDRLKSKGILNEAG---ELTDGGGFLIDSLIEYYQSKKYVRMNQLMFAFLEKTPNELLVMIEITPQKEYRFERMNKIYALEMIKDFFPLIRREPGERETEFLKEELTNEERKRATAFDPEKNFISMEFFHVDEEPKEKNNAKYYKQYLAFEMEDKLMMVDVVNDTYYRGSQYALLKLLFDELEFPYEEAK |
2PEX Chain:A ((44-121)) | -------DLTYPQYLVMLVLWETD---ERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTRVIIALTETGRALRSKAGAV------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26973 for 420 contacts (-64.2/contact) +
2D Compatibility (PS) -6429 + (NN) 95 + (LL) 14756
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -21851.0 ( -52.03 by residue)
QMean score : 0.579
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