Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGL-ETEIKKLRMRLNAAITPEK-TIIIQQIEAELAQYFNGELID--FKTPIRYIG-SDFQENVWEELR-RIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
| 1MGT Chain:A ((21-169)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGRVQGIAFAFDRGTLMKRIHDLAEHLGKRGVSISLDVQPSDYPEKVFKVLIGELDNASFLRELSFEGVTPFEKKVYEWLTKNVKRGSVITYGDLAKALNT--SPRAVGGAMKRNPYPIVVPCHRVVAHDG-IGYYSSGIEEKKFLLEIEGV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49026 for 1006 contacts (-48.7/contact) +
2D Compatibility (PS) -15892 + (NN) -8515 + (LL) 12196
1D Compatibility (HY) -11200 + (ID) 1900
Total energy: -74337.0 ( -73.89 by residue)
QMean score : 0.573
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