Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKPRIYTMSFASVYPLYIQKAEKKDRTKEEVDEIIFWLTGYDQDSLQQAIDQAIDFETFFAEAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLVDELAKGKKMEKILRK
3K12 Chain:A ((46-95))
-----------------IDRLLQSVGSDRGQVLSVRILLAHRE--DYAGL---NQVWDQWFPEG--RAPTRACS------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3K12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7747 for 240 contacts (-32.3/contact) +
2D Compatibility (PS) -5561 + (NN) -3268 + (LL) 5496
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -13330.0 ( -55.54 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_3K12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K12-query.scw
PDB file :
Tito_Scwrl_3K12.pdb
: