Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMVEKWRPYRT---EVKGIAVSCPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSFDT-------------KKLRGTFFGRTGSAVELIKRIASKKNLPNKKDGEHVFELINQGDEEANAIFDAYIYELASQILNIQYLIDPEIIAIGGGISAQPVVVERLNDAVAEIKAANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR
2AP1 Chain:A ((25-326))MYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVCELVEEADQRFGVKGSVGIGIPGMPETEDGTLYA-ANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHYYD--QSLQAPEIIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSNFTAITTQLAERLPRHLLP---VARAPRIERARHGDAGGMRGAAFLHLT--------


General information:
TITO was launched using:
RESULT:

Template: 2AP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -185168 for 2463 contacts (-75.2/contact) +
2D Compatibility (PS) -31179 + (NN) -15522 + (LL) 336
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -248633.0 ( -100.95 by residue)
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_2AP1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AP1-query.scw
PDB file : Tito_Scwrl_2AP1.pdb: