Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAILEGTAVLEGPTNEGRWMINALIGQHALFGMESLLETKTAPELTEYRVRALENGTVLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYK-NINQAPIVKVTRILVEIIELLHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLSKKPITISSHENLLDQVDSFQTGNGLLTR
3FX3 Chain:A ((32-228))
-------------SQAVWRSYDRGETLF---LQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPY----PVSAEAVTPCEVMHIPSPVFVSLMRRDPEICISILATTFGHLHSLVAQLEQLKAQTGAQRVAEFLLELCDC----------EVTLPYDKMLIAGRLGMKPESLSRAFSRLKAAGVTVKRNHAEIEDIALLRDYAES----------
General information:
TITO was launched using:
RESULT:
Template:
3FX3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106325 for 1350 contacts (-78.8/contact) +
2D Compatibility (PS) -20088 + (NN) -624 + (LL) 2376
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -134311.0 ( -99.49 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_3FX3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FX3-query.scw
PDB file :
Tito_Scwrl_3FX3.pdb
: