Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MAFEENLYCDYTPGAAKAVAGKDVILAVFN--AAGDKLLAVAGQQGLTVNRSK-----DSIEITS----KDTVGGWKSKIGGMKE--WSIE---NDGLYVADAESHKELAKYFESDSPVCVKIINQASKKGLFGGLAIVADYSFEAPFDEAM-TYSVKLDGM-GALVDLTITEGGDQMPGETPVAPAE-----------
4QW2 Chain:A ((3-202))
EELVVEVRGSNGA-FYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPPVGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACTYNEIVTIERLRSVNPNKPATKDTFHKIKLDVPEDLQ----QMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKRAHMLIDMHFRSLRTKLSLIMR
General information:
TITO was launched using:
RESULT:
Template:
4QW2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21759 for 1096 contacts (-19.9/contact) +
2D Compatibility (PS) -16969 + (NN) 9233 + (LL) -112
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -35457.0 ( -32.35 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_4QW2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QW2-query.scw
PDB file :
Tito_Scwrl_4QW2.pdb
: