Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVDSEMNHDFDLEKQFAFFVVNFRMSKHDFEELTEVEKNFIMKEWENKVIFESTMLRNAVLNAEQNLNRK--RNSRFIDLHKKRQKKADVNYTVNALQAISENEAKEGKAWIDRIYGANGLRRPKNKEERRNVNGGF
2VPN Chain:A ((211-269))-------------------TAMMANQDFYEGLSEEDQQLVQDAADAAYDHTIEHIKGLSEESLE-KIKAASDEVTVTRL---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2VPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 597 for 221 contacts (2.7/contact) +
2D Compatibility (PS) -6201 + (NN) -1816 + (LL) 4564
1D Compatibility (HY) 1200 + (ID) 200
Total energy: -1856.0 ( -8.40 by residue)
QMean score : 0.313

(partial model without unconserved sides chains):
PDB file : Tito_2VPN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VPN-query.scw
PDB file : Tito_Scwrl_2VPN.pdb: