Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -LNIMIALIPALLWGTVPLIITKFGGSTRQQTMGMTLGALTFAVIVFFFTDPVYTLKTVGISFITGCLWTVGQMFQL--QAFKIIGVSKAMPISTGMQLVGTTLC--------GVILFHEWDTTLRIILGFIALALIVGGIFLTSYAEKEE-------------DGTNALKQGLITLFISACGYVGLVVLIQGFKI-----------DGINAI-LPQAIGMVISALIMTHSG-GTEKRFNKRTL--------LLTIP-----------GVIWAAGNVAMVHANQLVGVATGFSLSQLGVVISTIGGII-LLKEKKTQKEM--LFVIVGVVLVVLGGILIGVAK-GA--------------- |
| 5COZ Chain:A ((12-358)) | DLNDYENVLNSLDEEQIGKLPQNIKCVVNDK--------LNIDSEINIWDATSYYVKSGKVKAINFSE-NKDKCYDLMEKLAKAINLNKDVCVQSHRSENGNEIYLWDNNYTQDSIAIRNDSALAETHDGKLAVSASKFGTYYSPFNDKDKFRTDKQLMFMSAEEAEELAVKTAKELEINVCEKNELYVLDDKNTLIFPEDDTDKQNDTYVFFMFPDVYGIPYSRCPENEALTGYANQENHLVIAMDEKGISFLDIPPLYDWVETTETGEILHPSSILSKEVDKLKKYVTSG-----DIEVSEISLEYMLFADKNETYDIKPVWVVYYYQNQLVTGENSYTQKMALYDVYDAYTGEEYRIQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5COZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158628 for 1879 contacts (-84.4/contact) +
2D Compatibility (PS) -27199 + (NN) 9572 + (LL) 1068
1D Compatibility (HY) 8000 + (ID) 1000
Total energy: -168187.0 ( -89.51 by residue)
QMean score : 0.034
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