Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MPKTIASIKTNLDSRLGKALTLKANGGRKKTIERCGILAE--TYPSVFI-VELDQDENNFERVSYSYTDILT------DAVELVFTDDNKELAL
1XEE Chain:A ((31-121))
NSGLPTTLGKLDERLRNYLKK------GTKNSAQFEKMVILTENKGYYTVYLNTPLAEDRKNVELLGKMYKTYFFKKGESKSSYVINGPGKTNEYAY
General information:
TITO was launched using:
RESULT:
Template:
1XEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14912 for 526 contacts (-28.3/contact) +
2D Compatibility (PS) -8392 + (NN) -771 + (LL) 756
1D Compatibility (HY) -7600 + (ID) 900
Total energy: -31819.0 ( -60.49 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_1XEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XEE-query.scw
PDB file :
Tito_Scwrl_1XEE.pdb
: