Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISITAPAKINLSLDALYKREDGYHEVEMVMTTIDLADRLYLERLDEDKIVLDVKAHFIPEDRRNLIYQAALLLKKRFDVKMGVRITIDKHIPVSAGLAGGSSDAAAALKGLNVIWELGLSIEELAEISSEIGSDIAFCVYGGTALATGRGEKISALPNIPGCWIVLAKPSISVSTPTIYKELQVDNVEH-PDTQKMIESIKNGDLDGIFAATGNVLESVTLEKNPQVKRIKDRMLAFGAEAALMSGSGPTVFALIKQYSRAKRVYNGLRGFCEEVYMVRPWSEGENDTNINY |
| 2V8P Chain:A ((3-270)) | HMIKVLSPAKINLGLWVLGRLPSGYHEILTLYQEIPFYDEIYIREGV---LRVETN-IGIP-QEENLVYKGLREFERITGIEINYSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLGKSAIGRGKGEVLEPVETEISGKITLVIPQVSSSTGRVYSSLREEHFVTPEYAEEKIQRIISGEVEEIENVLGDIAR----ELYPEINEVYRFVEYLG-FKPFVSGSGSTVYFFGGASEEL---KKAAKMRGWKVVELE------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138729 for 2258 contacts (-61.4/contact) +
2D Compatibility (PS) -28852 + (NN) -6516 + (LL) 1288
1D Compatibility (HY) -14400 + (ID) 3700
Total energy: -190909.0 ( -84.55 by residue)
QMean score : 0.419
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