Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKAKSKVARIENRYIKDTATMKKTRSRRRIALFRRLAFMAIIFAVVGGLLTITYTKQVLTLKEKKEKQVQVDKKMVAMKDEQDSLNEQIKKLHNDDYIAKLARSEYYLSKDGEIIFNIPEENSKQKE |
1NLW Chain:A ((50-78)) | --------------------------------------------------------------KKLEDSDRKAVHQIDQLQREQRHLKRQLE------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NLW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6526 for 107 contacts (61.0/contact) +
2D Compatibility (PS) -3236 + (NN) -2238 + (LL) 8884
1D Compatibility (HY) -400 + (ID) 250
Total energy: 9286.0 ( 86.79 by residue)
QMean score : 0.735
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