Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKTSLACSECGSRNYTVNVSGTQKETRLEVKKFCRHCNKHTLHRETK
1TWF Chain:L ((27-58))
----LKYICAECSSKLSLSR----------TDAVRCKDCGHRILLK---
General information:
TITO was launched using:
RESULT:
Template:
1TWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8866 for 166 contacts (-53.4/contact) +
2D Compatibility (PS) -3257 + (NN) 379 + (LL) 1280
1D Compatibility (HY) -800 + (ID) 350
Total energy: -11614.0 ( -69.96 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_1TWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TWF-query.scw
PDB file :
Tito_Scwrl_1TWF.pdb
: