Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDGYMLYGYEHGKRNSEFKTTDFDEFKYEVFLHICWYMGMEFELRHRKEDIERDDNILETDTRKIAFEKTLQLLKMVNPAWIDKAAIGYSNYLNLWRKNKNVYFDKEAMQFKVNL |
| 2K5D Chain:A ((1-110)) | MMRLANGIVLDKDTT-----------------FGE--LKFSALRREVRIQNEDGSVSDEIKERTYDLKS---------------------KGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTLE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31239 for 651 contacts (48.0/contact) +
2D Compatibility (PS) -10815 + (NN) 3713 + (LL) 3684
1D Compatibility (HY) -1200 + (ID) 950
Total energy: 25671.0 ( 39.43 by residue)
QMean score : -0.105
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