Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRNYHVKFLNEKDVELAEAVCAASEDYYLI--EQDK-SASKSDALKIITEIPDGKTRFDKFVLAVLDENEKPIGLVDIVSDYPRKGRWFIGLLLLTPDARHNGLGKVLHQTIKEWASD-GGADSLALGVLAENEKGRGFFEHLGYTKEETKQA--SYGGKEQEVSIFTLAIK
3R9F Chain:A ((19-187))
-NDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFI-KYKTKIAGVVSFNIIDHANKTAYIG-YWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYSKVI-
General information:
TITO was launched using:
RESULT:
Template:
3R9F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45850 for 1169 contacts (-39.2/contact) +
2D Compatibility (PS) -17408 + (NN) -4782 + (LL) 624
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -75016.0 ( -64.17 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3R9F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R9F-query.scw
PDB file :
Tito_Scwrl_3R9F.pdb
: