Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VFIHGFQEEVGNLWQETLRHPFVRSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVEQAGTAELAAEMREVQVRLQQSELLMREQFYPRVGLTERDFSERKPAPTAYHYTSHLHRMVDFGSFGVTIAALLPCYALYADIGKMYEGARSSEPFYQELLDSYVDENYQKVVLQQKRLVEQAASM------ADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV
3MVU Chain:A ((9-226))
-AFSLMRAEAEPAWRAYTHHAFVEGLKAGTLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGTVNALVAEEMQLHIGICEASGISQEALFATRERAENLAYTRFVLEAGYSGDLLDLLAALAPCVMGYGEIGKRLTAEA-TSTLYGDWIDTYGGDDYQAACKAVGTLLDDALERRLGAEFTSSPRWSRLCQTFHTATELEVGFWQMGLTP----------
General information:
TITO was launched using:
RESULT:
Template:
3MVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115831 for 1691 contacts (-68.5/contact) +
2D Compatibility (PS) -23285 + (NN) -12763 + (LL) 656
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -164073.0 ( -97.03 by residue)
QMean score : 0.659
(partial model without unconserved sides chains):
PDB file :
Tito_3MVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MVU-query.scw
PDB file :
Tito_Scwrl_3MVU.pdb
: