Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFPQVLTIAGSDSGGGAGIQADIKTFQERRTFGMSVITAI-TAQNTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVVRNIRLHNFPNLVIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILG-EKITTKAEIERAAKKIYDMGVKAVVIKGGHS-EMTEAADFYFDGVTAKWLTSERFDTPHTHGTGCTFSACIAAELAKGNSLLDSVMVAKEFISSAIKYPLGIGHGHGPTNHFAY-RMEDGK |
| 4C5N Chain:C ((5-267)) | ----KVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLET-ALSIGPDAIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVM---------NPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGGKALDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRIE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124444 for 2273 contacts (-54.7/contact) +
2D Compatibility (PS) -27921 + (NN) -9547 + (LL) 888
1D Compatibility (HY) -14400 + (ID) 5100
Total energy: -180524.0 ( -79.42 by residue)
QMean score : 0.545
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