Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELVLDTLNQLS-LPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA |
3L3U Chain:A ((8-153)) | ------------------------------------------------------------------------------------------------------------------SPGIWQLDCTHL----EGKVILVAVHVASGYIEAEVIPA-ETGQETAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACDWAGIKQEDGIPYNPQSQGVIESMNKELKKIIGQVR----DQAEHLKTAVQMAVFIHNH-KRKGGIGGYSAGERIVD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48754 for 1103 contacts (-44.2/contact) +
2D Compatibility (PS) -15302 + (NN) -6674 + (LL) 10488
1D Compatibility (HY) 3600 + (ID) 1250
Total energy: -57892.0 ( -52.49 by residue)
QMean score : 0.262
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