Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSAHSQLEQQLQQIKKAKITAETDADQTRRKQNEQDWLEEDSNQLTQEKRVLLDFLRSGWQGEEASSFHRYLEEQQHEESQVWRRDLQDKRSDLDTELQENKDRLHTLEAKQATLQKEWSQ |
3VP9 Chain:A ((38-71)) | ------------------------------------------------------------------------------------QKDYDFKMNQQLAEMQQIRNTVYERELTHRKMKD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7229 for 127 contacts (56.9/contact) +
2D Compatibility (PS) -3775 + (NN) -1470 + (LL) 7236
1D Compatibility (HY) -800 + (ID) 250
Total energy: 8170.0 ( 64.33 by residue)
QMean score : 0.794
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