Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKPLVGINMKNYINTRAQTSEWLEATIPLLGNFSDVDTFIFPSMGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGDETL--VRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG
1M7P Chain:B ((35-244))
----------------------------------SKLDVVVFPVSVHYDHTRKLLQ-SKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLID--NFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDII--------
General information:
TITO was launched using:
RESULT:
Template:
1M7P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102940 for 1589 contacts (-64.8/contact) +
2D Compatibility (PS) -22708 + (NN) -11350 + (LL) 2712
1D Compatibility (HY) -17200 + (ID) 3850
Total energy: -155336.0 ( -97.76 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_1M7P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M7P-query.scw
PDB file :
Tito_Scwrl_1M7P.pdb
: