Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDGRLGTNAIMIADNIATCTNSEHIYIFCDIGSAILSAETALELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH
3B48 Chain:A ((2-125))
KADILLVSHSKMITDGIKEMIEQMN-EEITIHSLGGTSDGSLGSDPMKIIDTINEADSDREFLIFADLGSAVLSSELAFDMLEEDQQKHYHLVDAPLVEGAFASAITAG-SDDLTQILAEAQN--
General information:
TITO was launched using:
RESULT:
Template:
3B48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13536 for 871 contacts (-15.5/contact) +
2D Compatibility (PS) -12047 + (NN) 1409 + (LL) 244
1D Compatibility (HY) 6400 + (ID) 700
Total energy: -18230.0 ( -20.93 by residue)
QMean score : 0.191
(partial model without unconserved sides chains):
PDB file :
Tito_3B48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B48-query.scw
PDB file :
Tito_Scwrl_3B48.pdb
: