Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSKEKGADLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSGAPG---NRQVEHENVINAAKKAGVSYIAYTSFAGAD-KSTSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEMPMIGGALSAGKFVYAAENGKVGWALKREYAEVAAKAVAG-AGFPEILELSGPLMTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDALRELLK |
| 3E48 Chain:A ((1-279)) | MNIMLTGATGHLGTHITNQAIANHI-DHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDE---PKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQTLQSFLQE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97340 for 2290 contacts (-42.5/contact) +
2D Compatibility (PS) -29854 + (NN) -15741 + (LL) 820
1D Compatibility (HY) -14400 + (ID) 3450
Total energy: -159965.0 ( -69.85 by residue)
QMean score : 0.565
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