Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGEDEGEQTKTKKDSNKVVKTASR--PKLSTKDLALIKADLAEFEARELSSEKILKDTIKEESWSDLDFANDNINQMIGTMKRYQQEILSIDAIKRSSEASADTEAFKKIFKEWSE--FKIERIQVTIDLLNGKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK-
4LEU Chain:A ((71-252))-----------------KLIGKEALFVILGLKRL---------KEDDEKLDKFIKTHVFRLLKLDMLAVIGELERQEETALA-IKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFP-DSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKDFEELFPEKHAYDPPEE


General information:
TITO was launched using:
RESULT:

Template: 4LEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 18010 for 1340 contacts (13.4/contact) +
2D Compatibility (PS) -18385 + (NN) -5499 + (LL) 2168
1D Compatibility (HY) -9600 + (ID) 1450
Total energy: -14756.0 ( -11.01 by residue)
QMean score : 0.257

(partial model without unconserved sides chains):
PDB file : Tito_4LEU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LEU-query.scw
PDB file : Tito_Scwrl_4LEU.pdb: