Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VAKIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQ--IEVDGGVNDELAKECTLAGADLIVVGSYLFEGDIEANLEKLAKGVLTE
2FLI Chain:D ((5-204))
--KIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKA----------------
General information:
TITO was launched using:
RESULT:
Template:
2FLI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -174750 for 1693 contacts (-103.2/contact) +
2D Compatibility (PS) -21776 + (NN) -12934 + (LL) 1712
1D Compatibility (HY) -20400 + (ID) 4600
Total energy: -232748.0 ( -137.48 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_2FLI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FLI-query.scw
PDB file :
Tito_Scwrl_2FLI.pdb
: