Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQILFIQTGFGVDVHGQNITKAAERAVRNAI-FTNSMPGIQGLLPD--GDLQNMVVNIKLA---LPCDADQLDEDTIRA--IIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
4UZZ Chain:A ((2-109))
------AASPKQIQMWINNVAEIRKTKQPHSVSYTKPMPEIDELMQEWPQEIEEILQHLKIPSEELDFNLSDFCKLACAILDIPVHDQPNESNVIESLHVLFTLYSEFKSNQHF-------------
General information:
TITO was launched using:
RESULT:
Template:
4UZZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3295 for 511 contacts (-6.4/contact) +
2D Compatibility (PS) -10375 + (NN) -623 + (LL) 2120
1D Compatibility (HY) -5200 + (ID) 550
Total energy: -17923.0 ( -35.07 by residue)
QMean score : 0.005
(partial model without unconserved sides chains):
PDB file :
Tito_4UZZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UZZ-query.scw
PDB file :
Tito_Scwrl_4UZZ.pdb
: