Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRDGHTHTEFCPHGTHDDVEEMILKAIELDFDEYSIVEHAPLSREFMNNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYEDFTRDFLDEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLTYLEGVKQSIEADLGLFKPRRIGHISLCQKFQQFFGADTSNFSGEVMEEFQAILALVKKRDYELDFNTAGLFKSLCGETYPPKEIVTLARELKIPLVYGSDSHGVQDIGRGYNTYCQK---------------------- |
2YXO Chain:A ((1-263)) | -MVDSHVHTPLCGHAE-GHPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESR----------MRLEALPFYLLALERVRERA-QDLYVGIGLEADFHPGTEGFLAQLLRRYPF--DYVIGSVHYLGAWP--LDHPDHQEEYAWR------DLKEVFRAYFQEVEKAARSG----LFHAIGHLDLPKKF------GHRLPEEALLELAEPALRAVAEAGLFLDVNTAGLRRPA-KEVYPAPALLRRARELGIGLVLGSDAHRPEEVGFAFPEVQALLAGLGFREAYYFVEGSPVAYPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69567 for 2075 contacts (-33.5/contact) +
2D Compatibility (PS) -26454 + (NN) -14070 + (LL) 2416
1D Compatibility (HY) -13200 + (ID) 3200
Total energy: -124075.0 ( -59.80 by residue)
QMean score : 0.459
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