Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIPDNLLQPVVGKKQVEPKESLAEELVELPFISLLMENSPAPLIKGEADNEEQATIPLKEIA-----PSLVSAKLLDSEPETKLPSAPLE-LKEVKETLAAIAKQAIDQPK--------IDSAPQVAQPPEMNTPK------EPTKNTTREQQPPPELIMPTK------------DSPKLAENVAKNQPALAKLPQEKEAVQLFKASIKEP---VTAKEEVAVKKPAESSNIWHDTTKQLTPAAKVEVPVTLKQ-------LDKTI-TDQIEQLQKFQVKQNKAFFAIQPESLGKVEVLLKKMPDKIF-------VHIEYQEQTAKQKL--EQMAQDLHNRFRDRGVEVAVTMTEK------QAPKENGQGSEGRHHGESKKEKERENPHQEKAKQQVFDLEEET |
| 4D10 Chain:C ((3-403)) | --SALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDN--NMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDG-EIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 117100 for 2274 contacts (51.5/contact) +
2D Compatibility (PS) -36165 + (NN) -14455 + (LL) 540
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: 54770.0 ( 24.09 by residue)
QMean score : 0.301
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