Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------MNKDNRKELIRAYKEKSPDAGVYRFISTKSGKSLIDN-------TMDLKGIANKLAFGVKIGAG-----NMLPPEMAKEAKEH----GIDTIQFEILEKVDIKPEMTKEDIKEENDVLLSLWLEREDI------- |
| 1YHU Chain:D ((1-149)) | AASCTTEDRREMQLMWGNVWSAQFTGRRIAIAQAVFKDLFANVPDAVGLFGAVKGDEVNSNEFKAHCIRVVNGLDSSIGLLSDPATLNEQLSHLATQHKARSGVTKGGFSAIAQS-FLRVMPQVASCFNPDAWSRCFNRITTGMTEPLPA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YHU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19591 for 692 contacts (28.3/contact) +
2D Compatibility (PS) -11696 + (NN) -5334 + (LL) -76
1D Compatibility (HY) 0 + (ID) 600
Total energy: 1885.0 ( 2.72 by residue)
QMean score : 0.151
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