Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIENRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIRDSGLTFILTG-DIPAMWLRDSVCQVRPFLIFAKENEEIESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFFKMLQTIFALWEVEQHHETKSPYR--------------F--ERLDCVPS----DTLKRNGL-GTETAYTGML-------WSGFRPSD-------DA----CEYGYLIPSNMFAVVVLGYAKEIIEAFYPSEIETIKQAATLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPIYQNTRKFILSK-SNPYYFEGKLAK---GIGSPHTPAGYIWPIGLA--IQGLT-ASDKSEKLEILQMLLRTDA----GTGLMHESFHPDY-PEDF------TREWFSWANMMFCELVLDVAGFRMANVLKN |
| 2JG0 Chain:A ((113-508)) | ----------------------------------------------PEPYVVPGGRFREVYYWDSYFTMLGLAES--G---HWDKVADMVANFAHEIDTYG----HI---P-NGN---------RSYY--LSRSQPPFFALMVELLAQHEGD-AALKQYL-PQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRP--ATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDN--AMANQYETLANARQKGIEKYLWNDQQG--WYADYDLKS-HKV---RNQLTAAALFPLYVNAAAKDR--ANKMATATKTHLLQ----PGGLNTTSVKSGQQWDA-PNGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145258 for 2788 contacts (-52.1/contact) +
2D Compatibility (PS) -36156 + (NN) -16981 + (LL) 7288
1D Compatibility (HY) 4000 + (ID) 2100
Total energy: -189207.0 ( -67.86 by residue)
QMean score : 0.383
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