Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDY-FDEEINIPLNRVAKIRGVRTKI-LGKELLSNILEIDMISGVKYQFVV------------------NKQKKWLEAVSEVLESRGESEKLG
2D9Z Chain:A ((28-126))
------------------------YWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITD-TMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMSGP------
General information:
TITO was launched using:
RESULT:
Template:
2D9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45369 for 430 contacts (-105.5/contact) +
2D Compatibility (PS) -8648 + (NN) -3892 + (LL) 1768
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -58041.0 ( -134.98 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_2D9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D9Z-query.scw
PDB file :
Tito_Scwrl_2D9Z.pdb
: