Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIRLARIDDRLIHGQVATVWTKETQVERIIVISDDVAKDEVRKTLLTQVAPPGVKASVVDVQKGIRVYNNPKYATTPVMLLFTNPTDVLTLVEAGVNITTVNIGGMAFREGKHMITNAVSVDETDEAAFRKLD-EKGIELEIRKVASDNKVKLIPLLDKDK
3P3V Chain:A ((5-162))
PNIIMTRVDERLIHGQ-GQLWVKFLNCNTVIVANDAVSEDKIQQSLMKTVIPSSIAIRFFSIQKVIDIIHKAS-PAQSIFIVVKDLQDAKLLVEGGVPITEINIGNIHKTDDKVAITQFISLGETDKSAIRCLAHDHHVVFNTKTTPAGNSASDVDILDY--
General information:
TITO was launched using:
RESULT:
Template:
3P3V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101366 for 1261 contacts (-80.4/contact) +
2D Compatibility (PS) -16239 + (NN) -2207 + (LL) 272
1D Compatibility (HY) -14000 + (ID) 2300
Total energy: -135840.0 ( -107.72 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_3P3V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P3V-query.scw
PDB file :
Tito_Scwrl_3P3V.pdb
: