Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLAMINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK
3CJN Chain:A ((17-159))
----LAEIGLEGYAPYLMNRIMGRYNANLRKEMTALGLSTAKMRALAILSAKDGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREV--D--DQRSSRVYLTPAGRAVYDRLWPH--MRASHDRMFQGITPQERQAFLATLNKMLANIRV--
General information:
TITO was launched using:
RESULT:
Template:
3CJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53379 for 907 contacts (-58.9/contact) +
2D Compatibility (PS) -15004 + (NN) -4670 + (LL) 640
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -75513.0 ( -83.26 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_3CJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CJN-query.scw
PDB file :
Tito_Scwrl_3CJN.pdb
: