Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVAPFYADHVGSILRTKGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHSVKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDI-----EYQ----PYLDD---AEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPA---DMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLANDIWGE |
| 1J93 Chain:A ((131-352)) | --------------------------------------------------------------------------------------------------------------------GEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWAT--------------ELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYAS-GSG-----------GLLERL-PLTGVDVVSLDWTV----DMADGRRRLGP-NVAIQGNVDPGVL-FGSKEFITNRINDTVKKAGKGKHILNLGHGIKV---------GTPEENFAHFFEIAKGLR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J93.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81115 for 1618 contacts (-50.1/contact) +
2D Compatibility (PS) -22605 + (NN) -9702 + (LL) 10056
1D Compatibility (HY) -2800 + (ID) 1500
Total energy: -107666.0 ( -66.54 by residue)
QMean score : 0.458
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