Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLIINENEQLVAETVSRRIIELVKE-----KPASLICIAGGDTPLLTIEALIKANQAGEVDFSNTQFVGLDEWVGLGRETKGSCIQTLYDAFFDRLKNVSSEQICFFDGKATSLTDECARVDKFIDDRGGMDFILLGIGLNGHIGFNEPFVPVDVNCHVVELDDVTKRVMSKYFDTDLPL--THGISLGMQQILAAKEIFLVATGEKKIDIVKQVVEKEPTVAIPATLVKD-SNTMLVVDKIAASGVEA-------------------------------- |
| 1NE7 Chain:A ((1-281)) | MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHI-DIHPENTHILDGNAVDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVDPLYSIKEKETEKSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203157 for 2075 contacts (-97.9/contact) +
2D Compatibility (PS) -25862 + (NN) -9769 + (LL) 64
1D Compatibility (HY) -13200 + (ID) 3150
Total energy: -255074.0 ( -122.93 by residue)
QMean score : 0.671
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