Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFENYQFPKDFLWGGAIAANQAEGAFKVDGKGISLADLHKYHKGKTNDEISEEQHKGVSLADIKASIEDKINYYPKRHGIDFYHTYPEDLELLAEMGFKTFRTSLDWTRIFPTGEETEPNEAGLKYYDQLIDKIIELGMEPIITILHYETPVEIVLNHGGWHNRKVIDLFEKYGKTVLDRYNKKVKYWIVINQINLIQFE--PFNSTAIPYDAVDDYLSATYQAVHNQFVASAKIYEYGKALNPDLMIGTMLADCTAYPFSCDPDDIVLA-MKRNRMEYFFADVQFQGEYPQYALNYFEENNIHIEITEEDKAILQKNTMDYLALSYYYSQMVDSKRND-LDPASITPNPHLKANPWGWAVDPKGLYNALSQYWDRY-HKPIIIAENGFGMYDKL-ENGEIHDDYRIDYLSAHLKEMKRAMYGGVEIIAYCAWGPIDIVSCSSAQMEKRYGFIYVDLDNEGNGTGKRIKKDSFSWYKKVIESNGEDLEA |
| 4PTV Chain:B ((7-445)) | ------FPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENG---------DTGDI---------------ACDHYHLYREDIELMKEIGIRSYRFSTSWPRILPEG-KGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLP-QALQDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHA---PGTKDFKTAL-QVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPAYPAGDSEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRD-IDFLGINYYSRMVVRHKPGDNLFNAEVVKMEDRPSTEMGWEIYPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYYVWSLMDNFEWAYG-YSKRFGLIYVDYEN-GN---RRFLKDSALWYREVIE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205217 for 3785 contacts (-54.2/contact) +
2D Compatibility (PS) -45362 + (NN) -14283 + (LL) 2760
1D Compatibility (HY) -28400 + (ID) 7400
Total energy: -297902.0 ( -78.71 by residue)
QMean score : 0.521
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