Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFIDNNNEKDPRINLAVEEFILTELNLD-EPVLLFYINKPSIIIGRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFITEDDG-ESFHNFAKFTQPIVEALKRLGVNAELKGR----------NDLLIDGFKVSGNAQFATKGKMFSHGTLMYDLNLDNVAASLKPRKDKIESKGIKSVRSRVANISDFMDQEMTTEEFRDLLLLYIFGVEKVEDVKEYKLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGVITDIKIFGDFFGVKNVADIEEKLVNTTYKREVLAEALVDIDVKEYFGNITKDEFLDLLY |
| 2C8M Chain:A ((4-256)) | RLLLL-ETPGNTRMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPVNKKTDIMAGEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK---------------ERVANVTDFV--DVSIDEVRNALIRGFSETLHI-DFREDTITEKEESLARELFDKKYSTEEWNMGL-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120729 for 1867 contacts (-64.7/contact) +
2D Compatibility (PS) -24109 + (NN) -8159 + (LL) 7164
1D Compatibility (HY) -16400 + (ID) 3600
Total energy: -165833.0 ( -88.82 by residue)
QMean score : 0.585
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