Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYRLVSE-RQFEEANIEEA-LTEDVVVVRPTYLSICAADQRYYTGSRGKEMLSKKLPMALIHEGVGQVTYDATGEFEIGTKVVMIPN--TPTEDD---PVIAENYRRSSLFRSS---GYDGLMQENVFMRRDRVVRLPENMDMEVAAYSELISVAFHAITRFKQK---ANANQSVFGVWGDGNLGFITCLLLKTI-YPESKVIIFGKTQ---YKLDFF-S-FVDEAHLVDE----I-PEGLVIDNAFECAGGKGSQYAVEQIIDLIKPEGTISLLGVSENP-IEFNS----RMVLEKGLTVFGSSRSGKEDFQNTVNFLSENERAVEYLSSLIGQRKVVRNLQDIIEAFETDLRNPFGKTVMEWKV |
| 2B5W Chain:A ((1-355)) | --MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGF-PEGEDHLVLGHEAVGVVVDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQ-AELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATGF---PKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFTKLPK--WFLEDLVTGVHP---LSEFEAAFDDDDT--TIKTAIEFS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160594 for 2695 contacts (-59.6/contact) +
2D Compatibility (PS) -35203 + (NN) -8745 + (LL) 928
1D Compatibility (HY) -7200 + (ID) 3300
Total energy: -214114.0 ( -79.45 by residue)
QMean score : 0.476
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