Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIRERILADMQVAETIDAHEEIRKSVEFLKAYLKKNTFLKSFVLGISGGQDSTLTGKLAQMAISEMRAETGDDEYRFFAVSLPYGTQLDESDRQDALNFMEPDNRLTVNIKASVDASVAALAEAGVE-LSDFAKGNEKARERMKVQYAIAAMHKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNKRQGKALLKELGCPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLEGKEVPADAAAKIENWFIKTEHKRHMAITIFDDFWK |
2PZ8 Chain:B ((1-272)) | MTLQEQIMKALHVQPVIDPKAEIRKRVDFLKDYVKK-TGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGN--ATFIAVRLPYKVQKDEDDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNKGNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTKRQGRALLQELGADERLYLKMPTADLLDEKPGQADETELGITYDQLDDYLEGKTVPADVAEKIEKRYTVSEHKRQVPASMFDDWWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33817 for 2231 contacts (-15.2/contact) +
2D Compatibility (PS) -29813 + (NN) -16369 + (LL) -52
1D Compatibility (HY) -22400 + (ID) 7650
Total energy: -110101.0 ( -49.35 by residue)
QMean score : 0.479
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