Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MPSIRYIVKTDVA--------------ETFEIIKAGQVGSNIVFSEVRT--FDFGEL----ATLACEKFYFRSSNRAALFVTINNFHGETEVTIISTGSSNGFFTGIDWGAAFDYMHSVVADL-KRVAIREVAIEKQEEI-------
3C5O Chain:A ((4-155))
TPTLETKYVFTITARIGDVTSAGEIGTGVRRIIPILGGEVKGEGISGQVLPFGADFQIIRPNELIELEAKYAFETDDGAVVYVENVGIRFGPVELLRKGEPVDPKVIYFRTRPRFETGHPNYQWLMQYLFVGSAARHADRVVIDVHQVL
General information:
TITO was launched using:
RESULT:
Template:
3C5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33579 for 791 contacts (-42.5/contact) +
2D Compatibility (PS) -12473 + (NN) 3774 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -45028.0 ( -56.93 by residue)
QMean score : 0.037
(partial model without unconserved sides chains):
PDB file :
Tito_3C5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C5O-query.scw
PDB file :
Tito_Scwrl_3C5O.pdb
: