Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------LSKQNVPSYGGQAVVEGVM------FGGRKQTVTAIRRIDGSLEYFYL----EKNSPVWVMRMKKIPFLRGIVALIESSAIG-SKHLAFATDRYDEDPNNPVEEEKIEKKESKVAMWLGVAVIGILSFVFAKFVMTLI-------------PVFLAELFRPIVPGDTAQV--------FLESLFKLILLLTYIFAVSQTPIIKRVFQYHGSEHKVINCYEENLPLTVENVQK--QSRLHYRCGSSFILFTVIVGMFIYLLVPTDPLWLRVVDRI---------LLIPVVLGVAFEVLQLTNKCRNIPVLKYLGVPGLWLQLLTTKEPSDDQVEVAIASFNELLRVEKEGAPIDVVEPDNLELLE---------------------------- |
| 3NMZ Chain:A ((326-736)) | DKDDMSRTLLAMSSSQDSCISMRQSGCLPLLIQLLHGNDKDSVLSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEPGMDQDKNPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIAT--NEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181289 for 2510 contacts (-72.2/contact) +
2D Compatibility (PS) -33321 + (NN) -11153 + (LL) 156
1D Compatibility (HY) 3600 + (ID) 1450
Total energy: -223457.0 ( -89.03 by residue)
QMean score : 0.227
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