Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRKPIEELNIEAGLEHMKAHDMADIVVHAPYII------------NIGNSVKPETFELGVNFLQSEIERTRALGAKQIVLHPGAHVGEGADKGIKQIIQGLNEALIH--DQDVQIALETMAGKGSECGRTFEELAQIIDGVTHNELLSVTFDTCHTHDAG-YDIVNDFDGVLNQFDKIVGIDRLKVLHINDSKNERGA----HKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGGDKASKKAPYKWEIAMLKNGEFDPDLLNKIQNS |
| 3TVA Chain:A ((11-288)) | -WPIGVFTSVD--AGLGVHLEVAQDLKVPTVQVHAPHPHT-----RTREHAQAFRAKCDAAGI-QVTVIFGGFDGESYADIPTTARTVGL-VPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPE-SSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ-------ESADHLLEFIEDVN-RPNLGINFDPANMILYGTGNP----IEALRKVA-----RYVRSIHCKDALWAPVNERGKSWGQEVALGTGDVGMEAYLTTLWEIGYRG-PLTIEREIPHDP-VQQKKDLASALELLTGLRKKIA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110941 for 2142 contacts (-51.8/contact) +
2D Compatibility (PS) -27722 + (NN) -7950 + (LL) 1688
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -152275.0 ( -71.09 by residue)
QMean score : 0.413
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