Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------LT-LL-DKLNEDMKQAMRDKEKEKLSVIRMLK-AALQNEAIHQGVKDLTPDDEVTVISRELKQRRDSLAEFDKAGRSDLSDKVRSEIVIVEDYAPKQLTPEELENIVK----ATIEEV-GASSKADFGKVMSAIMPK----VKGKADGGAVNQFVKKYLS |
| 4RGP Chain:A ((2-256)) | NATEQETLTILLDVYAYYQAYQIVKASQFFSDDIIFLLELLKERRELNVDFLFQNQVHLQELELTYHISLLDNAYEEELLANYIMDLEAKLRNDHIIDFVRSVSPILYRLLMRLMQSQVADINDYIYDAKNDQYDTWKFDKMHDSANPFVQNFVAK-GRDSKIT---------SRSLADFIQ--LTDLPQAIKDNILLLRDFEKS--VRNPLAHLIKPFDEEELHRTTGFSSQTFLEKIIQLAVFSGIHYDNDKFYFDKVNELIKRIYQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RGP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19633 for 791 contacts (24.8/contact) +
2D Compatibility (PS) -14205 + (NN) -4722 + (LL) 1476
1D Compatibility (HY) -9600 + (ID) 1350
Total energy: -8768.0 ( -11.08 by residue)
QMean score : 0.291
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