Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGFGNKDIGIDLGTANTLVYMKGKGI---------VLREPSVVAMKKDTQEIVAVGSDAKNMIGRTPGNIVAI--------------------RPMK-----DG-------------VIADYDTTAAMMKYYIQKAGKSVNASKPRVMICVPSGITGVEKRAVIDATRQAGAKDAFTIEEPFAAAIGAGLPVG-------EPTGSMVVDIGGGTTEVAVISLGG--I--V-TSRSVRTAGDDLDEVIINYIRKKYNLL-------------IGDRTAEAIKMEIGSASPKGLDLSPFSIRGRDLVTGLPKTIEITPEEISEALADTVAAIIDAVKGTLENTPPELSADIMDKGIVLTGGGALLRNLDTVISEETKMPVIIADEPLDCVAIGTGKALENMDMYKRKKMN |
| 3D2F Chain:A ((2-391)) | -----STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGP---KNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTN-----APFSVE--SVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSA---EEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126551 for 2586 contacts (-48.9/contact) +
2D Compatibility (PS) -33839 + (NN) -8913 + (LL) 872
1D Compatibility (HY) -5600 + (ID) 3150
Total energy: -177181.0 ( -68.52 by residue)
QMean score : 0.430
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