Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSHTHPTADDIYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYGDASSRFDFST-SNHYHAICNVCGKIVDFHYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN
2XIG Chain:A ((8-148))
----ESILERLRMSIKKNG--NSKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFISVLETSKSGRRYEIAAKEHHDHIICLHCGKIIEFADPEIENRQNEVVKKYQAKLISHDMKMFVWCKECQES----
General information:
TITO was launched using:
RESULT:
Template:
2XIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77659 for 890 contacts (-87.3/contact) +
2D Compatibility (PS) -15050 + (NN) -5697 + (LL) 740
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -107316.0 ( -120.58 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_2XIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XIG-query.scw
PDB file :
Tito_Scwrl_2XIG.pdb
: