Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LHILLTGATGFIGDHLVHELEKSDHELYILTRQKLKNR----ANVHY-IEWLNEDKLPNLEDLPVDVCINLAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSKSTIYLDTEENTY-ADNFLGKTVYEWEKTASAA-SD-LGIRVVYARFGLVLGTNGG---SFPVFEKLFQTYT-GGRFGNGRQWYSWIHVDDVVAAILFIFDHEQINGVVNFTAPHPVQEKKFAERLGKKMHKPYKTPVPKKIIKFILGERAMTILDSQRAYPEKLM-SNHFEFRFETLQEALDDLLD |
| 3VPS Chain:A ((8-300)) | HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS--DVRLVYHLASHKSV--PRSFKQP-LDYLDNVDSGRHLLALCTSV--GVPKVVVGSTCEVYGQADT-LPTPEDS-PLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP-LPSVVNFGSGQSLSVNDVIRILQATSPAAEVARKQPR-----PNE-----ITEFRADTALQTRQIGERSGGIGIEEGIRLTLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VPS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134481 for 2390 contacts (-56.3/contact) +
2D Compatibility (PS) -29790 + (NN) -6462 + (LL) 1836
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -182147.0 ( -76.21 by residue)
QMean score : 0.375
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