Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPTFHADKPIYSQISDWMKKQMITGEWKGEDKLPSVREMGVQLAVNPNTVSRAYQELERAGYIYAKRGMGSFVTSDKALFDQLKIELADAITERFLEEAKSIGLDDQAAIELLIKRSRNHE
2WV0 Chain:B ((1-98))
MNINKQSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFVSKP-------KMEQALQGLTSFTEDMKSRGM-----------------
General information:
TITO was launched using:
RESULT:
Template:
2WV0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13279 for 639 contacts (-20.8/contact) +
2D Compatibility (PS) -10308 + (NN) -1878 + (LL) 2160
1D Compatibility (HY) -4800 + (ID) 1750
Total energy: -29855.0 ( -46.72 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_2WV0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WV0-query.scw
PDB file :
Tito_Scwrl_2WV0.pdb
: