Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MIENELEHAKKTEKIEFGVNRRLIFSSCLL--WMAVGLLLYVVFSHIKGVNGIEEMI-----LLVFIGLC--------VLRPLFRLI--NIAPTVELTERG------VAYRGDFKSWNEIKKTELKKPAMMLFSQGRLIIMTSINGRE-EVAWDIVAADVSISLEELEKLIQSMRSTYTDDETIGMEIFVEKK----------------------- |
| 1YVE Chain:I ((12-236)) | ATTFDFDSSVFKKEKVTLSGHDEYIVRGGRNLFPLLPDAFKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLISDSAQADNYEKVFSH-MKPNSILGLSHGFLLGHLQSLGQDFPKNISVIAVCPKGMGPSVRRLYVQGKEVNGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70697 for 1126 contacts (-62.8/contact) +
2D Compatibility (PS) -17148 + (NN) 5294 + (LL) 104
1D Compatibility (HY) 400 + (ID) 900
Total energy: -82947.0 ( -73.67 by residue)
QMean score : 0.177
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