Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHLFKLDPAKNLPTNDVTKLIHSGTDGFIIGGTDNVQIEAVQNLYELLVETDLPIFLEISNESMILPEADHFLIPVVLNTENSKWTHG-------LHKELIKEMGEFIPWKRVTSEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMYGDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMAKYADTIIVGNIIYED-LEKALETATIFRKKTV
2F6U Chain:B ((10-232))
-RHITKLDPDRTNTDEIIKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQYGLPIVVEPSDPSNVVYDVDYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPIIYIEYSGTYGNPELVAEVKKVLDKARLFYGGGIDSREKAREMLRYADTIIVGNVIYEKGIDAFLET---------
General information:
TITO was launched using:
RESULT:
Template:
2F6U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118556 for 1698 contacts (-69.8/contact) +
2D Compatibility (PS) -23612 + (NN) -11333 + (LL) 1212
1D Compatibility (HY) -20400 + (ID) 4400
Total energy: -177089.0 ( -104.29 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_2F6U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F6U-query.scw
PDB file :
Tito_Scwrl_2F6U.pdb
: