Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLLVVGSGG-REHAISKKLLASNNVEKVFCAPGNDGMRLDDIQLVAISETDKAGLIDFAKKAEIAFVIVGPEVPLLEGVVDALEEAGIKAFGPKANAALIEGSKDFAKQFMEKYAIPTAASRTFTDYAEAKAYLNERGVPIVIKADGLAAGKGVTVALEMEEAVLALKDMMLEEKFGDASLKVVIEDFLAGEEFSLMAFVNGEEVYPMSIAQDHKRAYEGDKGPNTGGMGAYSPVPHISEAV-IEEAVQKILLPTAKGMVKEGRYFRGILYAGLILTADGPKVIEFNARFGDPETQVVLPRLESDFAALIDALLHNEKPDVRFKKTGLTLGVVLASAGYPEHYEKGNKLTGLNDIAEDVAIYHAGTKQDENGDFISDGGRVLLLAKEAETMSDARTLLYPEMQKLDNPNFFYRIDIGTKAE |
2YRX Chain:A ((22-435)) | MNVLVIGRGGREHAIAWKAAQSPL-VGKLYVAPGNPGIADVA-ELVHIDELDIEALVQFAKQQAIDLTIVGPEAPLASGIVDRFMAEGLRIFGPSQRAALIEGSKAFAKELMKKYGIPTADHAAFTSYEEAKAYIEQKGAPIVIKAD----GKGVTVAQTVEEALAAAKAALVDGQFGTAGSQVVIEEYLEGEEFSFMAFVNGEKVYPLAIAQDHKRAYDGDEGPNTGGMGAYSPVPQISDEMMDAAL-EAILRPAAKALAAEGRPFLGVLYAGLMATANGPKVIEFNARFGDPEAQVVLPRLKTDLVEAVLAVMDGKELELEWTDE-AVLGVVLAAKGYPGAYERGAEIRGLDRISPDALLFHAGTKR-EGGAWYTNGGRVLLLAAKGETLAKAKEKAYEQLAAIDCDGLFYRRDIGR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216300 for 3591 contacts (-60.2/contact) +
2D Compatibility (PS) -44665 + (NN) -24089 + (LL) 672
1D Compatibility (HY) -36400 + (ID) 10900
Total energy: -331682.0 ( -92.36 by residue)
QMean score : 0.518
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