Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQSETKALEALQNGS-DIRGIAIATEKYQITLTDERVEKIAYGFAKWLKEEKKVEGQAKVAIGHDSRLSAERLKAALVKGLTFAGIDVVDVGLATTPAMFMATQY------EDYDCDAGIMITASHLPFMYNGLKLFTKSGGAEH-EDIDYIVAHADKSFIENGLNLGKVTKQDLLSTYAADLTDKIRAGITDAADKMKPLQGSHIIVDAGNGAGGFFAEKVLAELGADISESQFLDPDGNFPNHIPNPDNEEAMASLKKAVLASGADLGVIFDTDVDRAAIMDKNGESLNRNPLIAVISSIILEEKPGTTIVTDSTTSGHLQAFIEAKGGKQHRFKRGYRNVINEALRLNANGTPSEIAIEVSGHAALKENY-FLDDGAYLIAKILMTYATLRKNGQDLPDLIADLKEPAESEEIRLSITANDFKAYGKEALADFLTFVEADPDMELEPVNQEGIRVNTKGALGEGWFLLRMSLHEPVMPMNLESDEAGGIRKVKDRLAGFFATKADLKM |
3UW2 Chain:A ((22-477)) | -------MISQSIFKAYDIRGVI------GKTLDADVARSIGRAFGSEVRAQ----GGDAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSCIVVTGSHNPPDYNGFKMVLR-GAAIYGDQIQGLYKRIVDARF--ETGSGSYEQYDVADQYVERIVGDIKL-----------TRPLKLVVDAGNGVAGPLATRLFKALGCELV-ELFTDIDGNFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRNLARWVREKGGEPLMWKTGHSLVKAKLRE-----TGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARV----ADPSALLNGLPNAVSTPE--LQL-------NVK-LIDKLRADAK-FDG-ADEVVTIDGLRVEY----PDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRRALKAA----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -186347 for 3994 contacts (-46.7/contact) +
2D Compatibility (PS) -47175 + (NN) -20123 + (LL) 3808
1D Compatibility (HY) -21600 + (ID) 6200
Total energy: -277637.0 ( -69.51 by residue)
QMean score : 0.525
|
|
|